Job Description P07001 Confidence 93.97% Date Thu Jan 5 10:59:54 GMT 2012 Rank 347 Aligned Residues 119 % Identity 29% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	F	K	E	E	A	G	S	G	D	G	Y	A	K	V	M	S	D	A	F	I	K	A	E	M	E
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G	L	T	G	P
Template Known Secondary structure		S			T	T									S												T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S						T	T				T						T	T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.																				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		241	.	.	.	.	.	.																		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	A	A	Q	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A	A	Q	N	G	G	N	C	E	Y	T	V	P	G	E	I	F	T	T
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		A	L	V	E	L	F	T	T	K	D	N	A	E	F	V	K	N	P	D	A	I	F	K	L	D	V	D	I	F	V	P	A	A	I	.	.	.	.	.	.	E	N	V	I	R	G	D	N	A	G	L	V	K	A	R	L	V	V	.	.	.	.	.	.	E	G	A	N	G	P	T	T	P	E	A	E	R	I	L	Y
Template Known Secondary structure										T	S						S	S	T	T	G	G	G	G				S						S		.	.	.	.	.	.	S	S		B		T	T	T	T	T	T				S				.	.	.	.	.	.			S	S	S		B
Template Predicted Secondary structure																																				.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		304	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	G	V	K	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	G	V	V	V	V
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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