Job Description P07001 Confidence 98.33% Date Thu Jan 5 10:59:54 GMT 2012 Rank 49 Aligned Residues 193 % Identity 19% Template c1j4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus Resolution 1.90 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		G	N	S	V	W	Q	S	E	I	I	L	K	V	N	A	P	L	D	D	E	I	A	L	L	N	P	G	T	T	L	V	S	F	I	W	P	A	Q	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	S	V	P	R	I	S	R	A	Q	S	L	D	A	L	S	.	.	.	.	S	M	A	N
Query Conservation																																																																										.	.	.	.
Alig confidence																																																													.	.												.	.	.	.
Template Conservation																																																													.	.
Template Sequence		E	D	A	H	K	D	V	E	V	E	Y	T	D	K	L	L	T	P	E	T	V	A	L	A	K	G	A	D	G	V	V	V	Y	Q	Q	L	D	Y	I	A	E	T	L	Q	A	L	A	D	N	G	I	T	K	M	S	L	R	N	V	.	.	G	V	D	N	I	D	M	A	K	A	K	E	L	G	F	Q	I	T	N
Template Known Secondary structure				T		T	T	S						S	S				T	T	T	G	G	G	G	T	T		S							S	S		B											T	T							S	S	S	.	.			T	T	B								T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		136	.	.	.											140	.	.	.	.	.	.	.	.	.	150	.	.	.	.									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Query Sequence		I	A	G	Y	.	.	.	.	.	.	.	.	.	.	R	A	I	V	E	A	A	H	E	F	G	R	F	F	T	.	.	.	.	.	.	.	.	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R
Query Conservation						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	V	Y	S	P	N	A	I	A	E	H	A	A	I	Q	A	A	R	I	L	R	Q	D	K	A	M	D	E	K	V	A	R	H	D	L	R	W	A	P	T	I	G	R	E	V	R	D	Q	V	V	G	V	V	G	T	G	H	I	G	Q	V	F	M	Q	I	M	E	G	F	G	A	K	V	I	T	Y	D	I	F
Template Known Secondary structure					S																			T										T	T					T	T						G	G	G	S								S													T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	F	K	E	E	A	G	S	G	D	G	Y	A	K	V	M	S	D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A
Query Conservation
Alig confidence			.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation			.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		R	.	.	N	P	E	L	E	K	K	G	Y	Y	V	D	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	L	Y	K	Q	A	D	V	I	S	L	H	V	P	D	.	V	P	A	N	V	H	M	I	N	D	E	S	I	A	K	M	K	Q
Template Known Secondary structure			.	.							T	T		B		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S						S			.		G	G	G	T	T		B	S							S		T
Template Predicted Secondary structure			.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		179			180	.	.	.	.	.	.	.	.	.	190	.	.	.																													.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	V	I	V	D	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	V	I	V	N	V	S
Template Known Secondary structure		T							S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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