Return to main results Retrieve Phyre Job Id

Job DescriptionP37662
Confidence100.00%DateThu Jan 5 11:56:35 GMT 2012
Rank3Aligned Residues390
% Identity12%Templated1pv7a_
SCOP infoMFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  QRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILL
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Template Sequence  NTNFWMFGLFFFFYFFIMGAY. . FPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGM
Template Known Secondary structure  S..


TTT
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   6...10.........20...... ...30.........40.........50.........60.........70.........80...
 
   87..90.........100.........110.........120.........130 .........140.........150.........160
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Query Sequence  GLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFP. . . . . . ERKGLISAFAIGSYGLGSLGFKFIDTQLLE
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Template Conservation                                                                                  
Template Sequence  LVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT
Template Known Secondary structure  TTTT
TTTTGGGGGTTS

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   161........170.........180.........190.........200.........210.........220.. .......230....
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Query Sequence  TVGLEKTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVM. . . . . . FLTACMSGLYVI
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Template Sequence  INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQF
Template Known Secondary structure 
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TTSS
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  GVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACV
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Template Sequence  ANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFAT. SALEVVILKTLH
Template Known Secondary structure  TTSSS
TT
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   244.....250.........260.........270.........280.........290.........300.........310 .........320..
 
   315....320.........330.........340.... .....350.........360... ......370.........380.........390
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Query Sequence  AFNFGGTITVFPSLVSEFFGLNNLAKNYGV. IYLGFGIGSICGSIIASLF. . . GGFYVTFYVIFALLILSLALSTTIRQP
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Template Sequence  MFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSG
Template Known Secondary structure  S
GGGTTT
S

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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   391........
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Query Sequence  EQKMLREAH
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Template Conservation     
    
Template Sequence  PGPLSLLRR
Template Known Secondary structure  SS
TT
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   403......410.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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