|   |
475 | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | L | D | V | V | R | Q | V | A | K | W | R | D | K | G | I | N | L | R | V | A | V | N | I | S | A | R | Q | L | A | D | Q | T | I | F | T | A | L | K | Q | V | L | Q | E | L | N | F | E | Y | C | P | I | D | V | E | L | T | E | S | C | L | I | E | N | D | E | L | A | L | S | V | I | Q | Q | F | S | Q | L | G |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
| . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
| . |
|   |
|
|
|
|
|
| . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
R | V | K | E | I | C | D | L | V | . |
. |
. |
. |
. |
. |
. |
. |
K | G | P | V | S | A | E | V | . |
. |
. |
. |
. |
V | S | L | D | Y | E | G | M | V | R | E | A | R | E | L | A | Q | I | S | E | Y | . |
V | V | I | K | I | P | M | T | . |
. |
. |
. |
. |
. |
P | D | G | I | K | A | V | K | T | L | S | A | E | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
| S |
|  |  |  |  |
| . | . | . | . | . | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | . |  |  |  |  |  |  | S | S | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
555 | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | |
|
. | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | |
|
. | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | V | H | L | D | D | F | G | T | G | Y | S | S | L | S | Q | L | . |
. |
A | R | F | P | I | D | A | I | K | L | D | Q | V | F | V | R | D | I | H | K | Q | P | V | S | Q | S | L | V | R | A | I | V | A | V | A | Q | A | L | N | . |
. |
L | Q | V | I | A | E | G | V | E | S | A | K | E | D | A | F | L | T | K |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |
| . | . |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
| . | . |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
| . | . | . |   |
|
|
|   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |   | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | K | T | N | V | T | . |
. |
. |
L | V | F | S | P | A | Q | A | I | L | A | A | K | A | G | A | T | Y | V | S | P | F | V | G | R | M | D | D | L | S | N | D | G | M | R | M | . |
. |
L | G | E | I | V | E | I | Y | N | N | Y | G | F | E | T | E | I | I | A | A | S | I | R | H | P | M | H | V | V | E | A | A | L |
Template Known Secondary structure |   |
|
|  |  |  |  | . | . | . |  |  |
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | B |  |  |  |  |  |  | T | T | S |
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  | B | S |
|
| S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | |
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
  |   |
631 | . | . | . | . | . | . | . | . | 640 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | I | N | E | R | Q | G | F | L | . |
. |
. |
. |
. |
. |
F | A | K | P | M | P | A | V | A | F | E | R | W | Y | K | R | Y | L | K |
Query Conservation |   |
  |
|   |
|   |   |
|
|   |   | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
Template Sequence |   |
M | G | V | D | I | V | T | M | P | F | A | V | L | E | K | L | F | K | H | P | M | T | D | L | G | I | E | R | F | M | E | D | W | K | K |
Template Known Secondary structure |   |
 | T |
| S |  |  |  |  |
|  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
  |