 |
Job Description | P77334 | Confidence | 78.36% | Date | Thu Jan 5 12:27:56 GMT 2012 |
Rank | 264 | Aligned Residues | 82 |
% Identity | 18% | Template | d1vc4a_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 1.80 |
|
 |
  |   |
545 | . | . | . | . | 550 | . | . | |
. | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | I | Q | Q | F | S | Q | . |
L | G | A | Q | V | H | L | D | D | F | G | T | G | Y | S | S | L | S | Q | L | A | R | F | P | I | D | A | I | K | L | D | Q | V | F | V | R | D | I | H | K | Q | P | V | S | Q | S | L | V | R | A | I | V | A | V | A | Q | A | L | N | L | Q | V | I | A | E | G | V | E | S | A | K |
Query Conservation |   |
  |   |   |   |   |
|   |   | . |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |   |
|   |   |
|
|
|   |   |
|
|
| . |
|   |   |   |   |
Template Sequence |   |
L | D | L | K | R | V | R | E | A | V | D | L | P | L | L | R | K | D | F | V | V | D | P | F | M | L | E | E | A | R | A | F | G | A | S | A | A | L | L | I | V | A | L | L | G | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | A | Y | L | E | E | A | R | R | L | G | L | E | A | L | V | E | . |
V | H | T | E | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  | G | G | G | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  | . |  |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
. | . | . | . | . |
  |
  |   |
624 | . | . | . | . | . | 630 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | A | F | L | T | K | N | G | I | N | E | R |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
Template Sequence |   |
E | L | E | I | A | L | E | A | G | A | E | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|