Return to main results Retrieve Phyre Job Id

Job DescriptionP77334
Confidence44.74%DateThu Jan 5 12:27:56 GMT 2012
Rank439Aligned Residues140
% Identity15%Templatec3rcyC_
PDB info PDB header:isomeraseChain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme-2 like protein from roseovarius sp. tm1035
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   476...480......... 490.........500.........510.........520.........530.........540.........550....
Predicted Secondary structure 
.


















Query SS confidence 













.
































































Query Sequence  ILDVVRQVAKWRDK. GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG
Query Conservation 
             .     
 



   
    
   
   
         
 


 
                
   
Alig confidence 













.












..



















......


















...

Template Conservation     
   
 


   
    
 



  ..     
      
    
  ......



    
      
   ...  
Template Sequence  ISLSVEFCRKIRAAVGDKADLLFGTHGQ. . FTTAGAIRLGQAIEPYSPLW. . . . . . YEEPVPPDNVGAMAQVARA. . . VR
Template Known Secondary structure  TTSS


S
..B
GGG

S......

S
TT
...SS
Template Predicted Secondary structure 








..




......



...

Template SS confidence 















































































   185....190.........200.........210.. .......220.........230.. .......240.........250. ..
 
   555....560.........570...... ...580.........590.........600.........610.........620.........630...
Predicted Secondary structure 







.
















Query SS confidence 





















.
























































Query Sequence  AQVHLDDFGTGYSSLSQLARFP. IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI
Query Conservation    
 




 
  
   
  
 . 
 



   
  
         
  
   
   

 






       
   
 
Alig confidence 





















.















.......

































Template Conservation 



 

           
     
 
  
    



 .......       
   

    
     
   
  

 
Template Sequence  IPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWE. . . . . . . MKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAA
Template Known Secondary structure  S

TT

STT

S


T.......TTT




SS
Template Predicted Secondary structure 


















.......







Template SS confidence 















































































   254.....260.........270.........280.........290.. .......300.........310.........320......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions