Return to main results Retrieve Phyre Job Id

Job DescriptionP77334
Confidence43.00%DateThu Jan 5 12:27:56 GMT 2012
Rank449Aligned Residues116
% Identity15%Templatec3qc3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   543......550.........560.........570..... ....580.........590.........600.........610 .........
Predicted Secondary structure 








..









.


Query SS confidence 
































. .


































.








Query Sequence  ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF. . PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL. NLQVIAEGV
Query Conservation         
   
  
 




 
  
   
  
..  
 



   
  
         
  
   
   .

 





Alig confidence 

















..












..










.






















.








Template Conservation             
    
 ..    
  
         
 
      . 
  
          
           
   

Template Sequence  PGALIKDIRENGXKVGLA. . IKPGTSVEYLAPWANQIDXALVXTVE. PGFGGQKFXEDXXPKVHWLRTQFPSLDIEVDGG
Template Known Secondary structure  TT
..
TTS
GGGGTTTGGGSSSS
.TT
SS



GGG
TT
SS
Template Predicted Secondary structure 



..








.














Template SS confidence 















































































   101........110........ .120.........130.........140.... .....150.........160.........170.......
 
   620.........630...... ...640.........650.........660.
Predicted Secondary structure 





.










Query SS confidence 
















.
























Query Sequence  ESAKEDAFLTKNGINER. QGFLFAKPMPAVAFERWYKRYLKRA
Query Conservation 
       
   
 
  .

     
                 
Alig confidence 
















.
























Template Conservation 
    
      


 






  
 

      
       
Template Sequence  VGPDTVHKCAEAGANXIVSGSAIXRSEDPRSVINLLRNVCSEA
Template Known Secondary structure 
STTTT



T
S
Template Predicted Secondary structure 










Template SS confidence 










































   178.180.........190.........200.........210.........220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions