Job Description P77334 Confidence 100.00% Date Thu Jan 5 12:27:56 GMT 2012 Rank 1 Aligned Residues 411 % Identity 23% Template c3pjwA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 Resolution 3.10 Å

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		I	T	E	E	R	R	A	Q	E	R	L	R	I	L	A	N	T	D	S	I	T	G	L	P	N	R	N	A	M	Q	D	L	I	D	H	A	I	N	H	A	.	D	N	N	K	V	G	V	V	Y	L	D	L	D	N	F	K	K	V	N	D	A	Y	G	H	L	F	G	D	Q	L	L	R	D	V	S	L	A	I	L
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		F	Q	E	Q	A	E	R	S	E	K	L	R	T	E	S	Y	Q	D	N	L	T	G	L	A	N	R	R	Y	F	E	M	Q	L	N	A	R	V	S	N	P	E	Q	A	S	S	G	Y	L	L	L	L	R	V	K	D	L	A	G	L	N	Q	R	L	G	G	Q	R	T	D	E	L	L	K	A	V	G	E	Q	L	S
Template Known Secondary structure						T	T											B		T	T	T	S	S														T	T		T	T	T												S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		302	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		S	C	L	.	.	.	.	E	H	D	Q	V	L	A	R	P	G	G	D	E	F	L	V	L	A	S	N	T	S	Q	S	A	L	E	A	M	A	S	R	I	L	T	R	L	R	L	P	F	R	I	G	L	I	E	V	Y	T	S	C	S	V	G	I	A	L	S	P	E	H	G	S	D	S	T	A	I	I	R	H	A
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																																																															.
Template Conservation																																																																							.
Template Sequence		R	E	C	A	K	Y	P	E	T	Q	N	L	V	T	R	I	R	G	G	E	F	A	V	L	A	P	G	M	T	R	E	E	A	L	Q	L	A	Q	S	L	D	S	A	L	S	S	L	Y	A	T	G	A	T	D	V	A	A	V	A	S	I	G	L	A	P	F	A	H	G	.	D	S	P	Q	A	V	L	S	L	G
Template Known Secondary structure					S	S		S	T	T	T	T							T	T								T																		T						T	S		S		T	T											T	T	.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		D	T	A	M	Y	T	A	K	E	G	G	R	G	Q	F	C	V	F	T	P	E	M	N	Q	R	V	F	E	Y	L	W	L	D	T	N	L	R	K	A	L	E	N	D	Q	L	V	I	H	Y	Q	P	K	I	T	.	.	W	R	G	E	V	R	S	L	E	A	L	V	R	W	Q	S	P	E	R	G	L	I	P	P
Query Conservation																																																								.	.
Alig confidence																							.	.	.	.	.	.																												.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		D	Q	A	L	A	Q	A	E	G	Q	G	E	Q	N	W	A	C	L	D	G	D	.	.	.	.	.	.	D	H	H	A	W	H	R	L	L	D	Q	A	L	N	Q	R	R	F	E	L	F	F	Q	P	V	V	A	A	Q	D	T	Q	L	V	L	H	Y	K	V	L	S	R	L	L	D	E	Q	G	Q	T	I	P	A
Template Known Secondary structure										S		S	S		S								.	.	.	.	.	.	S														T	T												S	S		T	T														T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.							.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	F	I	S	Y	A	E	E	S	G	L	I	V	P	L	G	R	W	V	I	L	D	V	V	R	Q	V	A	K	W	R	D	K	G	I	N	L	R	V	A	V	N	I	S	A	R	Q	L	A	D	Q	T	I	F	T	A	L	K	Q	V	L	Q	E	L	N	F	E	Y	C	P	I	D	V	E	L	T	E	S	C
Query Conservation
Alig confidence																														.	.	.	.	.																																															.
Template Conservation																														.	.	.	.	.																																															.
Template Sequence		G	R	F	L	P	W	L	E	R	F	G	W	T	A	R	L	D	R	L	M	L	E	R	V	L	E	Q	M	.	.	.	.	.	A	G	H	E	E	S	L	A	L	N	L	S	S	A	T	L	A	D	P	Q	A	L	N	K	V	F	E	I	L	R	A	H	S	N	L	G	A	R	L	T	L	E	I	G	E	E	.
Template Known Secondary structure										T	T	T																	G	.	.	.	.	.	G	G																S	S													T	G	G	G	T	T	T							G	G	.
Template Predicted Secondary structure																														.	.	.	.	.																																															.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.						490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	N	D	E	L	A	L	S	V	I	Q	Q	F	S	Q	L	G	A	Q	V	H	L	D	D	F	G	T	G	Y	S	S	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	V	R	D	I	H	K	Q	P	V	S	Q	S	L	V	R	A	I	V	A	V	A	Q	A	L	N	L	Q	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	P	E	Q	A	V	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	L	Q	R	F	G	G	R	F	S	M	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	A	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L	I
Template Known Secondary structure		G																	T	T										S		G	G	G	T	S	S							S						T	T	T	T	T	T	T	T	T																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	G	V	E	S	A	K	E	D	A	F	L	T	K	N	G	I	N	E	R	Q	G	F	L	F	A	K	P	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R	V	E	T	E	G	E	L	S	V	I	R	E	M	G	L	Y	G	V	Q	G	Q	L	F	G	E	P	K	P
Template Known Secondary structure							S									T	T	T		S				S	G	G	G				B
Template Predicted Secondary structure
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.