Job Description P77334 Confidence 83.24% Date Thu Jan 5 12:27:56 GMT 2012 Rank 236 Aligned Residues 82 % Identity 16% Template c3m07A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:putative alpha amylase; PDBTitle: 1.4 angstrom resolution crystal structure of putative alpha2 amylase from salmonella typhimurium. Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		525	.	.	.	.	530	.	.	.	.	.	.			.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.					.	560	.	.	.	.	.	.	.		.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																							.	.	.	.										.
Query SS confidence														.	.																							.	.	.	.										.
Query Sequence		C	P	I	D	V	E	L	T	E	S	C	L	.	.	I	E	N	D	E	L	A	L	S	V	I	Q	Q	F	S	Q	L	G	A	Q	V	H	.	.	.	.	L	D	D	F	G	T	G	Y	S	.	S	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	V	R	D	I	H	K	Q	P	V	S	Q
Query Conservation														.	.																							.	.	.	.										.
Alig confidence														.	.																							.	.	.	.										.				.	.	.	.	.												.	.	.	.	.						.
Template Conservation																																																							.	.	.	.	.												.	.	.	.	.						.
Template Sequence		Q	A	V	V	Y	E	M	H	T	G	T	F	T	P	E	G	T	F	R	A	A	I	A	K	L	P	Y	L	A	E	L	G	V	T	V	I	E	V	M	P	V	A	Q	F	G	G	E	R	G	W	G	Y	D	.	.	.	.	.	G	V	L	L	Y	A	P	H	S	A	Y	.	.	.	.	.	G	T	P	D	D	.
Template Known Secondary structure		G												S	S	S		S						T	T								T													S	S	S				S	T	T	.	.	.	.	.									T	T	T	.	.	.	.	.						.
Template Predicted Secondary structure																																																							.	.	.	.	.												.	.	.	.	.						.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	R	A	I	V	A	V	A	Q	A	L	N	L	Q	V	I	A	E	G	V
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	F	K	A	F	I	D	A	A	H	G	Y	G	L	S	V	V	L	D	I	V
Template Known Secondary structure		.	.											T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions