Job Description P77334 Confidence 72.87% Date Thu Jan 5 12:27:56 GMT 2012 Rank 306 Aligned Residues 79 % Identity 18% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

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		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.								.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.									560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		E	Y	C	P	I	D	V	E	L	T	E	S	C	L	I	.	.	.	.	.	.	.	E	N	D	E	L	A	L	S	V	I	Q	Q	F	S	Q	L	G	A	Q	V	H	L	.	.	.	.	.	.	.	.	D	D	F	G	T	G	Y	S	S	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	V
Query Conservation																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.														.
Template Sequence		K	R	A	D	I	S	Y	Q	L	L	L	Y	S	F	A	D	S	D	G	D	G	Y	G	D	L	N	G	V	T	Q	K	L	D	Y	L	N	Q	L	G	V	K	A	L	W	L	S	P	I	H	P	C	X	S	Y	H	G	.	.	.	.	.	.	.	.	.	.	Y	D	V	T	D	Y	T	K	V	N	P	Q	L	.
Template Known Secondary structure				S								T	T	T	S			S	S	S	S	S	S								T	T							T	T		S								S		B	S	S	T	T		.	.	.	.	.	.	.	.	.	.		S	B	S		T	T	S			T	T	T	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.											.	.	.	.	.	.	120	.	.	.	.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	I	H	K	Q	P	V	S	Q	S	L	V	R	A	I	V	A	V	A	Q	A	L	N	L	Q	V	I	A	E	G	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K	I	Y	L	D	Y	V
Template Known Secondary structure		.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions