Job Description P77334 Confidence 100.00% Date Thu Jan 5 12:27:56 GMT 2012 Rank 12 Aligned Residues 165 % Identity 25% Template c3ezuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution Resolution 1.95 Å

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		D	I	T	E	E	R	R	A	Q	E	R	L	R	I	L	A	N	T	D	S	I	T	G	L	P	N	R	N	A	M	Q	D	L	I	D	H	A	I	N	.	.	H	A	D	N	N	K	V	G	V	V	Y	L	D	L	D	N	F	K	K	V	N	D	A	Y	G	H	L	F	G	D	Q	L	L	R	D	V	S	L	A
Query Conservation																																									.	.
Alig confidence																																									.	.																								.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		A	L	F	R	L	W	N	E	A	R	Q	L	A	A	Q	S	H	F	D	A	L	T	G	V	X	T	R	A	G	F	F	K	T	V	G	S	L	A	Y	A	A	Q	R	S	G	S	N	V	G	I	X	L	I	D	L	D	Y	F	K	L	V	G	Q	T	.	.	.	.	.	G	D	R	I	L	Q	L	V	A	E	T
Template Known Secondary structure																			B		T	T	T		S	B																				T																				.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		I	L	S	C	L	E	H	D	Q	V	L	A	R	P	G	G	D	E	F	L	V	L	A	S	N	T	S	Q	S	A	L	E	A	M	A	S	R	I	L	T	R	L	R	L	P	F	R	I	G	L	I	E	V	Y	T	S	C	S	V	G	I	A	.	.	.	L	S	P	E	H	G	S	D	S	T	A	I	I	R	H
Query Conservation																																																																.	.	.
Alig confidence																																																.	.	.														.	.	.
Template Conservation																																																.	.	.
Template Sequence		I	T	S	H	L	R	R	S	D	V	V	G	R	Y	D	G	D	E	F	V	V	Y	L	S	P	V	E	P	A	S	L	R	T	V	A	E	N	L	R	R	S	I	E	E	E	S	.	.	.	A	R	X	V	P	V	T	A	S	I	G	V	A	Q	G	I	L	G	T	D	V	D	G	G	I	E	E	L	V	R	L
Template Known Secondary structure					T			T	T							S	S	S							S	S																					T	.	.	.	T	T	T																S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	T	A	M	Y	T	A	K	E	G	G	R	G	Q	F	C	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	E	C	L	X	Q	A	K	Y	T	G	K	N	K	V	V	V
Template Known Secondary structure												S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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