Job Description P77334 Confidence 98.80% Date Thu Jan 5 12:27:56 GMT 2012 Rank 80 Aligned Residues 140 % Identity 16% Template c3cloC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution Resolution 2.04 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																								.																									.	.	.	.	.	.	.
Query SS confidence																																								.																									.	.	.	.	.	.	.
Query Sequence		G	N	A	S	A	W	H	D	T	P	A	V	A	R	D	L	S	H	G	L	S	F	A	E	Q	V	V	S	E	A	H	S	A	I	V	I	L	D	.	S	R	G	N	I	Q	R	F	N	R	L	C	E	D	Y	T	G	L	K	E	H	D	V	I	.	.	.	.	.	.	.	G	Q	S	V	F	K	L	F	M	S
Query Conservation																																								.																									.	.	.	.	.	.	.
Alig confidence																																								.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	A	T	H	P	T	A	H	E	A	L	D	G	I	V	E	Q	H	Q	Q	F	V	R	S	L	T	E	V	N	G	G	C	A	V	I	S	D	L	S	N	R	K	S	Y	V	T	V	H	P	W	A	N	F	L	G	L	T	P	E	E	A	A	L	S	V	I	D	S	X	D	E	D	C	I	Y	R	R	I	H
Template Known Secondary structure					T	S	G	G	G	G	S																					S								T	T	T	T								T	T		G	G	G												T	T				T					T	T	B
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		163	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		R	R	E	A	A	A	S	R	R	N	N	R	V	F	.	.	.	.	.	.	.	.	.	.	F	R	S	G	N	A	Y	E	V	E	L	W	I	P	T	C	K	G	Q	R	L	F	L	F	R	N	K	F	V	.	H	S	G	S	G	K	N	E	I	F	L	I	C	S	G	T	D	I	T	E	E	R	R	A	Q
Query Conservation																.	.	.	.	.	.	.	.	.	.																														.
Alig confidence																.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		P	E	D	L	V	E	K	R	L	X	E	Y	K	F	F	Q	K	T	F	S	X	S	P	G	E	R	L	K	Y	R	G	R	C	R	L	R	X	X	N	E	K	G	V	Y	Q	Y	I	D	N	L	V	Q	I	X	Q	N	T	P	A	G	N	V	W	L	I	F	C	L	Y	S	L	S	A	D	Q	R	P	E	Q
Template Known Secondary structure																					T	S						T	T												T	T	S																T	T	S													S						S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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