Job Description P77334 Confidence 95.07% Date Thu Jan 5 12:27:56 GMT 2012
Rank 110 Aligned Residues 111
% Identity 17% Template c3cg0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: response regulator receiver modulated diguanylate cyclase
PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution 2.15 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
538 . 540 . . . . . . . . . 550 . . . . . . . . . 560 . . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
E N D E L A L S V I Q Q F S Q L G A Q V H L D D F G T G Y S S L S Q L A R F P I D A I K L D Q V F V R D I H K Q P V S Q S L V R A I V A V A Q A L N L Q V .
I A
Query Conservation  
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Alig confidence  
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Template Conservation  
                              .                                                       . . . . . . .                              
Template Sequence  
D G R L A A A T L R I Q L E S L G Y D V .
L G V F D N G E E A V R C A P D L R P D I A L V D I M L C G A L D G .
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V E T A A R L A A G C N L P I I F I
Template Known Secondary structure  
T . S S S S S S S S . . . . . . . S
Template Predicted Secondary structure  
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Template SS confidence  
   
15 . . . . 20 . . . . . . . . . 30 . . . .
. . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . .
. 70 . . . . . . . . . 80 . . . . . .
 
   
617 . . 620 . . . . . . . . . 630 . . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E G V E S A K E D A F L T K N G I N E R Q G F L F A K P M P A V A F E R W Y K R Y L K R
Query Conservation  
                                                                   
Alig confidence  
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Template Conservation  
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Template Sequence  
T S S Q D V E T F Q R A K R V N P F .
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G Y L A K P V A A D T L H R S I E M A I H K
Template Known Secondary structure  
T T S . . . . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
87 . . 90 . . . . . . . . . 100 . . . .
. . . . . 110 . . . . . . . . . 120 . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]