Job Description P77334 Confidence 95.35% Date Thu Jan 5 12:27:56 GMT 2012 Rank 107 Aligned Residues 135 % Identity 8% Template c3c2wB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of the photosensory core domain of p.2 aeruginosa bacteriophytochrome pabphp in the pfr state Resolution 2.90 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	I	L	D	S	R	G	N	I	Q	R	F	N	R	L	C	E	D	Y	T	G	L	K	E	H	D	V	I	G	Q	S	V	F	K	L	F	M	S	R	R	E	A	A	A	S	R	R	N	N	R	V	F	F	R	S	G	N	A	Y	E	V	E	L	W	I	P	T	C	K	G	Q	R	L	F	L	F	R	N
Query Conservation
Alig confidence																																										.	.	.	.	.	.																						.
Template Conservation																																										.	.	.	.	.	.																						.
Template Sequence		A	L	V	T	L	R	A	D	G	M	V	L	A	A	S	E	N	I	Q	A	L	L	G	F	V	A	S	P	G	S	Y	L	T	Q	E	Q	V	G	P	E	.	.	.	.	.	.	V	L	R	M	L	E	E	G	L	T	G	N	G	P	W	S	N	S	V	E	T	.	R	I	G	E	H	L	F	D	V	I	G	H
Template Known Secondary structure								T	T		B						T	T					S	S	S				T	T		B										.	.	.	.	.	.										T			S									.			S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.																						.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		K	F	V	H	S	G	S	G	K	N	E	I	F	L	I	C	S	G	T	D	I	T	E	E	R	R	A	Q	E	R	L	R	I	L	A	N	T	.	D	S	I	T	G	L	P	N	R	N	A	M	Q	D	L	I	D	H	A	I	N	H	A	D	N	N	K	V	G	V	V	Y
Query Conservation																																							.
Alig confidence		.	.	.	.	.	.	.																															.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	S	Y	K	E	V	F	Y	L	E	F	E	I	R	T	A	D	T	L	S	I	T	S	F	T	L	N	A	Q	R	I	I	A	Q	V	Q	L	H	N	D	T	A	S	L	L	S	N	V	T	D	E	L	R	R	M	T	G	Y	D	R	V	M	A	Y
Template Known Secondary structure		.	.	.	.	.	.	.			T	T														S	S																																							S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions