Job Description P77334 Confidence 77.25% Date Thu Jan 5 12:27:56 GMT 2012 Rank 274 Aligned Residues 154 % Identity 20% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540													.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		I	S	A	R	Q	L	A	D	Q	T	I	F	T	A	L	K	Q	V	L	Q	E	L	N	F	E	Y	C	P	I	D	V	E	L	T	E	S	C	L	I	E	N	D	.	.	.	.	.	.	.	.	.	.	.	.	E	L	A	L	S	V	I	Q	Q	F	S	Q	L	G	A	Q	V	H	L	D	D	F	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		V	P	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	.	.	.	.	.	L	E	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I	R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F
Template Known Secondary structure		S		T	T	S																	T	T	.	.	.	.	.																		T		T	T																			T										S	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
															563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.				.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G	Y	S	S	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	V	R	D	I	H	K	Q	P	V	S	Q	.	.	.	S	L	V	R	A	I	V	A	V	A	Q	A	L	N	L	Q	V	I	A	E	G	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.																						.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A	E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F
Template Known Secondary structure		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T																									T									S	S	S	S			T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
							619	620	.	.	.	.	.	.	.	.	.							630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure		.	.	.	.	.												.	.	.	.	.	.																				.
Query SS confidence		.	.	.	.	.												.	.	.	.	.	.																				.
Query Sequence		.	.	.	.	.	V	E	S	A	K	E	D	A	F	L	T	.	.	.	.	.	.	K	N	G	I	N	E	R	Q	G	F	L	F	A	K	P	M	P	A	V	.	A	F	E	R	W	Y	K	R	Y	L	K	R
Query Conservation		.	.	.	.	.												.	.	.	.	.	.																				.
Alig confidence		.	.	.	.	.												.	.	.	.	.	.																.	.	.		.
Template Conservation																																							.	.	.
Template Sequence		G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	.	.	.	K	N	D	V	L	A	M	T	E	Y	A	L	K	R
Template Known Secondary structure		T							S									T	T	S		S	T	T											T	T	S	T	.	.	.	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions