Job Description P77334 Confidence 99.47% Date Thu Jan 5 12:27:56 GMT 2012 Rank 50 Aligned Residues 107 % Identity 16% Template c3b33A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the pas domain of nitrogen regulation protein2 nr(ii) from vibrio parahaemolyticus Resolution 1.83 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	Q	V	V	S	E	A	H	S	A	I	V	I	L	D	S	R	G	N	I	Q	R	F	N	R	L	C	E	D	Y	T	G	L	K	E	H	D	V	I	G	Q	S	V	F	K	L	F	M	S	R	R	E	A	A	A	S	R	R	N	N	R	V	F	F	R	S	G	N	A	Y	E	V	E	L	W	I	P	T
Query Conservation
Alig confidence																																																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		L	P	S	A	I	L	N	N	X	V	T	A	T	L	I	L	D	D	G	L	A	I	R	Y	A	N	P	A	A	E	L	L	F	S	Q	S	A	K	R	I	V	E	Q	S	L	S	Q	L	I	Q	H	A	S	.	.	.	L	D	L	A	L	L	T	Q	P	L	Q	S	G	Q	S	I	T	D	S	D	V	T	F	V
Template Known Secondary structure											S	S							T	T		B												T	T	S						T	T		B						S				.	.	.			T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	G	Q	R	L	F	L	F	R	N	K	F	V	H	S	G	S	G	K	N	E	I	F	L	I	C	S	G	T	D	I
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		V	D	G	R	P	L	X	L	E	V	T	V	S	P	I	T	W	Q	R	Q	L	.	.	X	L	L	V	E	X	R	K	I
Template Known Secondary structure			T	T															T	T			.	.
Template Predicted Secondary structure																							.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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