Return to main results Retrieve Phyre Job Id

Job DescriptionP77334
Confidence88.44%DateThu Jan 5 12:27:56 GMT 2012
Rank193Aligned Residues92
% Identity13%Templatec2ya0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative alkaline amylopullulanase; PDBTitle: catalytic module of the multi-modular glycogen-degrading2 pneumococcal virulence factor spua
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   520.........530....... ..540.........550........ .560....
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Query Sequence  LNFEYCPIDVELTESCLI. . . . . . . . . . . . . ENDELALSVIQQFSQLGAQVH. . . . LDDFGT. . . . . . . . . . . . . . . . . .
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Template Sequence  FKTREDAVIYEAHVRDFTSDPAIAKDLTKPFGTFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNS
Template Known Secondary structure 
SSGGG




GGGTTT
SS
TTSTTT
SS

B
BSS
BGGGTTS


S

SSS
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   565....570.........580.........590.........600.........610.........
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Query Sequence  . . . . GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV
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Template Sequence  NYNWGYD. . . . . . . . PQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIHKRGMGAILDVV
Template Known Secondary structure  S


S
S........BS
SSSB
STTSS
TTSTTTT

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   207..210... ......220.........230.........240.........250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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