Return to main results Retrieve Phyre Job Id

Job DescriptionP77334
Confidence77.72%DateThu Jan 5 12:27:56 GMT 2012
Rank269Aligned Residues110
% Identity15%Templatec2rdmB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein from2 sinorhizobium medicae wsm419
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   538.540.........550.........560.........570.... .....580.........590.........600.........610......
Predicted Secondary structure 









.












Query SS confidence 




































.









































Query Sequence  ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR. FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA
Query Conservation              
   
  
 




 
  
   
  .
  
 



   
  
         
  
   
   

 


Alig confidence 





















..












.








....
























.


Template Conservation 
       
   
   
  
  ..
    

   
      



 
....  
     
  
   
        
.
  
Template Sequence  DEAILLLDFESTLTDAGFLVTA. . VSSGAKAIEXLKSGAAIDGVVTD. . . . IRFCQPPDGWQVARVAREIDPNXPI. VYI
Template Known Secondary structure  S
TT
..SSTT



....S

SSSS

TT

.
Template Predicted Secondary structure 




..






....











.
Template SS confidence 















































































   11........20.........30.. .......40.........50..... ....60.........70.........80 ...
 
   617..620.........630.........640.........650.........660
Predicted Secondary structure 
















Query SS confidence 











































Query Sequence  EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
Query Conservation 



       
   
 
  

     
                
Alig confidence 










..





....




















Template Conservation 
          ..      .... 
 

     
   
   
  
Template Sequence  SGHAALEWASN. . GVPDSI. . . . ILEKPFTSAQLITAVSQLLNA
Template Known Secondary structure  SS
STT..S
TT
....SS

T
Template Predicted Secondary structure 



..




....




Template SS confidence 











































   84.....90.... .....100 .........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions