Return to main results Retrieve Phyre Job Id

Job DescriptionP77334
Confidence54.43%DateThu Jan 5 12:27:56 GMT 2012
Rank391Aligned Residues133
% Identity14%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   476...480.........490.........500.........510.........520.........530.........540.........550... .
Predicted Secondary structure 


















.
Query SS confidence 













































































.
Query Sequence  ILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQL. G
Query Conservation 
                  
 



   
    
   
   
         
 


 
                
   .
Alig confidence 















































....

























.
Template Conservation         
  

  
  
   
          
     
  
   


.... 
 
 

 
   
  
  

  

    
Template Sequence  VRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVD. . . . SIALKDMAGILTPYAAEELVSTLKKQVD
Template Known Secondary structure  T




TT

TT
S....SSS


S
Template Predicted Secondary structure 













....









Template SS confidence 















































































   126...130.........140.........150.........160.........170... ......180.........190.........200.
 
   555.... 560.........570.........580.........590.........600.........610..
Predicted Secondary structure 
...

















Query SS confidence 




. . .




















































Query Sequence  AQVHL. . . DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL
Query Conservation    
 
...



 
  
   
  
  
 



   
  
         
  
   
   

Alig confidence 




...




















































Template Conservation 
 
  
 


 


 

 



 


  

 

 


   

   
 

  
   
 



Template Sequence  VELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGTYGHPATESLVATLQGTGYDTGL
Template Known Secondary structure  S


TTS
TT
SB
GGG
STTS

BTTSTT



Template Predicted Secondary structure 




























Template SS confidence 




























































   202.......210.........220.........230.........240.........250.........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions