Job Description P77334 Confidence 42.00% Date Thu Jan 5 12:27:56 GMT 2012 Rank 451 Aligned Residues 188 % Identity 16% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

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		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.													.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	R	W	V	I	L	D	V	V	R	Q	V	A	K	W	R	D	K	G	I	N	L	R	V	A	V	N	I	S	A	R	Q	L	A	D	Q	T	I	F	T	A	L	K	Q	V	L	Q	E	L	N	F	E	Y	C	P	I	D	V	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	E	S	C	L	I	E
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		L	S	V	V	E	H	R	L	R	A	R	Q	Q	K	Q	A	K	L	T	E	D	G	L	P	L	G	V	N	L	G	K	N	K	T	S	V	D	A	A	E	D	Y	A	E	G	V	R	V	L	G	P	.	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	R	S	L	Q	G	K	A	E	L	R	R
Template Known Secondary structure											T	T										T	T											T	T		S														G	G	.	G		S									T	T	S	T	T	S	G	G	G	G	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.		.	.	.	.	.	.	560	.	.	.	.	.	.	.	.							.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.															.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure																	.																.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	E	L	A	L	S	V	I	Q	Q	F	S	Q	L	.	G	A	Q	V	H	L	D	D	F	G	T	G	Y	S	S	.	.	.	.	.	.	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	D	I	H	K	Q	P	V	S	Q
Query Conservation																	.																.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.								.								.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	.	I	A	P	D	L	T	S	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D
Template Known Secondary structure												T	S		G	G	G								.			S																		T										B	S				T	T				T	T	T	T	S	S	S
Template Predicted Secondary structure																									.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.			.	.	.	.	.	.	.		.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.				.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure																.	.								.																				.	.	.
Query SS confidence																.	.								.																				.	.	.
Query Sequence		S	L	V	R	A	I	V	A	V	A	Q	A	L	N	.	.	L	Q	V	I	A	E	G	.	V	E	S	A	K	E	D	A	F	L	T	K	N	G	I	N	E	R	Q	.	.	.	G	F	L	F	A	K	P	M	P	A	V	A	F	E	R	W	Y	K	R	Y	L	K	R
Query Conservation																.	.								.																				.	.	.
Alig confidence																.	.								.																				.	.	.
Template Conservation
Template Sequence		L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	K	R	E	L	E	A	L	L	K	E
Template Known Secondary structure														T	T	T		S						S	S			S											T		S					S								T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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