Job Description P77334 Confidence 77.31% Date Thu Jan 5 12:27:56 GMT 2012 Rank 272 Aligned Residues 103 % Identity 20% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

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		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.										560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		E	N	D	E	L	A	L	S	V	I	Q	Q	F	S	Q	L	G	A	Q	V	H	L	.	.	.	.	.	.	.	.	.	D	D	F	G	T	G	Y	S	S	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	V	R	D	I	H	K	Q	P	V	S	Q	S	L	V	R	A	I	V	A	V	A	Q
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		G	N	L	A	G	L	K	G	R	L	D	Y	L	S	S	L	K	V	K	G	L	V	L	G	P	I	H	K	N	Q	K	D	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	D	L	L	Q	I	D	P	N	F	.	.	.	.	.	.	.	.	G	S	K	E	D	F	D	S	L	L	Q	S	A	K
Template Known Secondary structure			S					G	G	G						T	T	T														T	T		S	T	.	.	.	.	.	.	.	.	.	.	.	.	T								T	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.													.	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.																				.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	N	L	Q	V	I	A	E	G	V	E	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	A	F	L	T	K	N	G	I	N	E	R	Q	G	F	L	F	A	K	P	M	P	A	V	A	F	E	R	W	Y	K	R	Y	L	K	R
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	S	I	R	V	I	L	D	L	T	P	N	Y	R	G	E	N	S	W	F	S	T	Q	V	D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	Q	A	G	V	D	G	F	Q	V	R	D	I	E	N	L	K	D	A	S	S	F	L	A	E	W	Q	N	I	T	K	G
Template Known Secondary structure			T	T									T	T	T	T	S	S	S	T	T	S	S	S			T																T	T									G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions