Job Description P77334 Confidence 51.00% Date Thu Jan 5 12:27:56 GMT 2012 Rank 409 Aligned Residues 187 % Identity 16% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.			490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.						.	540	.	.	.	.	.
Predicted Secondary structure																			.	.																																																		.	.	.	.	.
Query SS confidence																			.	.																																																		.	.	.	.	.
Query Sequence		R	W	V	I	L	D	V	V	R	Q	V	A	K	W	R	D	K	.	.	G	I	N	L	R	V	A	V	N	I	S	A	R	Q	L	A	D	Q	T	I	F	T	A	L	K	Q	V	L	Q	E	L	N	F	E	Y	C	P	I	D	V	E	L	T	E	S	C	L	I	E	.	.	.	.	.	N	D	E	L	A	L	S
Query Conservation																			.	.																																																		.	.	.	.	.
Alig confidence																			.	.																																		.																.	.	.	.	.
Template Conservation																																																						.
Template Sequence		D	K	V	T	E	N	L	I	L	F	R	K	R	Q	E	E	D	K	L	L	S	K	H	I	V	G	V	S	I	G	K	N	K	D	T	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	.	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N
Template Known Secondary structure																			S	T	T	T	T											T	T		S														G	G	G	.		S									T	T	S	T	T	G	G	G	G	G	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		546	.	.	.	550	.	.																			.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.		570	.	.	.	.	.	.	.	.	.	580													.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	Q	Q	F	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	Q	V	H	L	D	D	F	G	T	G	Y	S	S	L	.	S	Q	L	A	R	F	P	I	D	A	I	.	.	.	.	.	.	.	.	.	.	.	.	K	L	D	Q	V	F	V	R	D	I	H	K	Q	P
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K
Template Known Secondary structure																			S	S	S	S	S										S																	T	T		S								B	S						G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.			.	.	.	.	.	.		.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.				.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure																			.	.							.																					.	.	.
Query SS confidence																			.	.							.																					.	.	.
Query Sequence		V	S	Q	S	L	V	R	A	I	V	A	V	A	Q	A	L	N	.	.	L	Q	V	I	A	E	.	G	V	E	S	A	K	E	D	A	F	L	T	K	N	G	I	N	E	R	Q	.	.	.	G	F	L	F	A	K	P	M	P	A	V	A	F	E	R	W	Y	K	R	Y	L	K	R
Query Conservation																			.	.							.																					.	.	.
Alig confidence																			.	.							.																					.	.	.
Template Conservation
Template Sequence		L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q
Template Known Secondary structure																	T	T	T		S						S	S			S										T	T							S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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