Job Description P77334 Confidence 56.16% Date Thu Jan 5 12:27:56 GMT 2012 Rank 385 Aligned Residues 110 % Identity 15% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		E	N	D	E	L	A	L	S	V	I	Q	Q	F	S	Q	L	G	A	Q	V	H	L	D	D	F	G	T	G	Y	S	S	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	V	R	D	I	H	K	Q	P	V	S	Q	S	L	V	R	A	I	V	A	V	A	Q	A	L	N	L	Q	V	.	I	A
Query Conservation																																																																															.
Alig confidence																								.	.																										.	.	.	.	.															.	.								.
Template Conservation																								.	.																										.	.	.	.	.															.	.
Template Sequence		D	D	K	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	S	.	.	A	E	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	L	L	.	.	.	.	.	P	D	V	N	G	L	E	I	L	K	W	I	K	E	.	.	R	S	P	E	T	E	V	I	V	I
Template Known Secondary structure																		T						.	.		S	S											S			S						S	B		.	.	.	.	.	S	S	S	B											.	.			T	T	S
Template Predicted Secondary structure																								.	.																										.	.	.	.	.															.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.
		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	E	S	A	K	E	D	A	F	L	T	K	N	G	I	N	E	R	Q	G	F	L	F	A	K	P	M	P	A	V	A	F	E	R	W	Y	K	R	Y	L	K	R
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		T	G	H	G	T	I	K	T	A	V	E	A	M	K	M	G	A	Y	D	F	.	.	.	.	L	T	K	P	C	M	L	E	E	I	E	L	T	I	N	K	A	I	E	H
Template Known Secondary structure				T	T										T	T	T					.	.	.	.				S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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