Job Description P0A8F8 Confidence 98.62% Date Thu Jan 5 11:07:44 GMT 2012 Rank 140 Aligned Residues 92 % Identity 49% Template c3fpnB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:geobacillus stearothermophilus uvrb interaction PDBTitle: crystal structure of uvra-uvrb interaction domains Resolution 1.80 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	T	V	G	M	I	I	D	Q	R	A	I	L	R	R	L	A	E	L	Q	Y	A	R	N	D	Q	A	F	Q	R	G	T	F	R	V	R	G	E	V	I	D	I	F	P	A	E	S	D	D	I	A	L	R	V	E	L	F	D	E	E	V	E	R	L	S	L	F	D	P	L	T	G	Q	I	V	S	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	L	R	V	G	M	E	I	E	R	N	A	L	L	R	R	L	V	D	I	Q	Y	D	R	N	D	I	D	F	R	R	G	T	F	R	V	R	G	D	V	V	E	I	F	P	A	S	R	D	E	H	C	I	R	V	E	F	F	G	D	E	I	E	R	I	R	E	V	D	A	L	T	G	E	V	L	G	E	R
Template Known Secondary structure						T	T		B													T	T					T	T				T	T						T	T							S	S	T	T										T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	F	T	I	Y	P	K	T	H	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	V	A	I	F	P	A	S	H	F	V
Template Known Secondary structure		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions