Job Description P0A8F8 Confidence 95.73% Date Thu Jan 5 11:07:44 GMT 2012 Rank 250 Aligned Residues 48 % Identity 33% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.															30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		Q	P	E	A	I	R	R	L	E	E	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	L	A	H	Q	T	L	L	G	V	T	G	S	G	K	T	F	T	I	A	N	V	I	A	D	L	.	.	.	Q	R	P	T	M	V	L	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		K	E	H	I	I	K	I	V	Y	E	E	L	V	K	L	L	G	E	E	A	K	K	L	E	L	N	P	K	K	Q	N	V	I	L	L	V	G	I	Q	G	S	G	K	T	T	T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A
Template Known Secondary structure																				S								S	S	S										S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions