Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8F8
Confidence96.74%DateThu Jan 5 11:07:44 GMT 2012
Rank200Aligned Residues46
% Identity35%Templatec2chgB_
PDB info PDB header:dna-binding proteinChain: B: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c domains 1 and 2
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11.... ....20.........30.... .....40.........50......
Predicted Secondary structure 



.....




.




Query SS confidence 




. . . . .


















.





















Query Sequence  FKPSG. . . . . DQPEAIRRLEEGLEDGLAH. QTLLGVTGSGKTFTIANVIADL
Query Conservation    
  ..... 
  

  
   
      . 

   





  
   
   
Alig confidence 




.....


















.





















Template Conservation 


    



       
   
        

 

 
 


 

  

 
 
Template Sequence  YRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDL
Template Known Secondary structure  TS
SSGGG

S
TT


S
TTSS
Template Predicted Secondary structure 

















Template SS confidence 



















































   11........20.........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions