Return to main results Retrieve Phyre Job Id

Job DescriptionP67662
Confidence21.24%DateThu Jan 5 12:10:46 GMT 2012
Rank399Aligned Residues205
% Identity12%Templated1xs5a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  PIGTLRIGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAAK
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Template Sequence  KDETVGVGVLSEPHARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVGNV
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STTTTT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   170. ........180.........190.........200.........210...... ...220.........
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Query Sequence  SY. . . LTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQG. . . . . . . . . . . . . . . . . RFVTNDPMTLVRW
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Template Sequence  HVEPLALYSRTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALLPR
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SGGG

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GGG
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   230.........240.........250.........260.........270.........280........ .290....
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Query Sequence  LTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSL. . . . . TDYFVE
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Template Conservation      

 
         
                                   
   
    
    
  
Template Sequence  VFDQVDGAVINGNYAIMAGLSARRDGLAVEPDASAYANVLVVKRGNEADARVQAVLRALCGGRVRTYLKE
Template Known Secondary structure  GGGSS
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TTTT
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GGGG
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   165....170.........180.........190.........200.........210.........220.........230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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