Job Description P67662 Confidence 95.72% Date Thu Jan 5 12:10:46 GMT 2012 Rank 116 Aligned Residues 77 % Identity 14% Template d1sfxa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 1.55

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Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																																							.	.	.	.
Query SS confidence															.	.																																							.	.	.	.
Query Sequence		K	R	M	S	V	F	A	K	V	V	E	F	G	.	.	S	F	T	A	A	A	R	Q	L	Q	M	S	V	S	S	I	S	Q	T	V	S	K	L	E	D	E	L	Q	V	K	L	L	N	R	S	T	R	S	.	.	.	.	I	G	L	T	E	A	G	R	I	Y	Y	Q	G	C	R	R	M	L	H	E	V	Q	D
Query Conservation															.	.																																							.	.	.	.
Alig confidence															.	.																										.													.	.	.	.
Template Conservation																																										.
Template Sequence		S	D	V	R	I	Y	S	L	L	L	E	R	G	G	X	R	V	S	E	I	A	R	E	L	D	L	S	A	R	F	V	R	D	R	L	K	V	L	L	K	.	R	G	F	V	R	R	E	I	V	E	K	G	W	V	G	Y	I	Y	S	A	E	K	P	E	K	V	L	K	E	F	K	S	S	I	L	G	E	I	E
Template Known Secondary structure																B										T																.	T	T	S								S	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		79	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	E	K
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions