Return to main results Retrieve Phyre Job Id

Job DescriptionP67662
Confidence62.63%DateThu Jan 5 12:10:46 GMT 2012
Rank267Aligned Residues40
% Identity18%Templated1s7oa_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like
Resolution2.31

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10....... ..20.........30.........40....
Predicted Secondary structure 
.



Query SS confidence 












.


























Query Sequence  KRMSVFAKVVEFG. SFTAAARQLQMSVSSISQTVSKLEDEL
Query Conservation    
  
  
   
.
 
 

  
 


 


  
  

  
Alig confidence 












.


























Template Conservation   

 

 
     

  


  



  

   
 

 
 
Template Sequence  KQMNYIELYYADDYSLAEIADEFGVSRQAVYDNIKRTEKIL
Template Known Secondary structure  T


T

Template Predicted Secondary structure 






Template SS confidence 








































   26...30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions