 |
Job Description | P67662 | Confidence | 46.15% | Date | Thu Jan 5 12:10:46 GMT 2012 |
Rank | 320 | Aligned Residues | 40 |
% Identity | 8% | Template | d1j1va_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| TrpR-like
| Chromosomal replication initiation factor DnaA C-terminal domain IV
|
Resolution | 2.10 |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | M | S | V | F | A | K | V | V | E | F | G | . |
S | F | T | A | A | A | R | Q | L | . |
Q | M | S | V | S | S | I | S | Q | T | V | S | K | L | E | D | E | L |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|   |   |   |
| . |
|   |
|   |
|
|   |   |
| . |   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |   |   |
Template Sequence |   |
R | Q | X | A | X | A | L | A | K | E | L | T | N | H | S | L | P | E | I | G | D | A | F | G | G | R | D | H | T | T | V | L | H | A | C | R | K | I | E | Q | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
407 | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|