Job Description P67662 Confidence 99.74% Date Thu Jan 5 12:10:46 GMT 2012 Rank 28 Aligned Residues 200 % Identity 15% Template d1ixca2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.20

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		G	T	L	R	I	G	C	S	S	T	M	A	Q	N	V	L	A	G	L	T	A	K	M	L	K	E	Y	P	G	L	S	V	N	L	V	T	G	I	P	A	P	D	L	I	.	.	.	A	D	G	L	D	V	V	I	R	V	G	A	L	Q	D	S	S	L	F	S	R	R	L	G	A	M	P	M	V	V	C	A	A
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.
Template Conservation
Template Sequence		G	E	L	S	V	A	Y	F	G	T	P	I	Y	R	S	L	P	L	L	L	R	A	F	L	T	S	T	P	T	A	T	V	S	L	T	H	X	T	K	D	E	Q	V	E	G	L	L	A	G	T	I	H	V	G	F	S	R	F	F	P	R	H	P	G	I	E	I	V	N	I	A	Q	E	D	L	Y	L	A	V	H
Template Known Secondary structure										S	G	G	G	G	T														T	T																				T	S		S					S						T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		K	S	Y	L	T	Q	Y	G	I	P	E	K	P	A	D	L	S	S	H	S	W	L	E	Y	S	V	R	P	.	D	N	E	F	E	L	I	A	P	E	G	I	S	T	R	L	I	P	Q	G	R	F	V	T	N	D	P	M	T	L	V	R	W	L	T	A	G	A	G	I	A	Y	V	P	L	M	W	V	I	N	E
Query Conservation																														.
Alig confidence																														.																																																			.
Template Conservation																																																																																	.
Template Sequence		R	S	Q	S	G	K	F	G	K	T	C	K	L	A	D	L	R	A	V	E	L	T	L	F	P	R	G	G	R	P	S	F	A	D	E	V	I	G	L	F	K	H	A	G	I	E	P	R	I	A	R	V	V	E	D	A	T	A	A	L	A	L	T	X	A	G	A	A	S	S	I	V	P	A	S	V	A	A	I	.
Template Known Secondary structure		G	G	G	G	G	G	T		S				G	G	G	G	T	T									S	S	S	S													T	T										S	S										T	T	S		B									T	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	R	G	E	L	E	I	L	L	P	R	Y	Q	S	D	P	R	P	V	Y	A	L	Y	T	E	K	D	K	L	P	L	K	V	Q	V	V	I	N	S	L	T	D	Y	F	V	E
Query Conservation
Alig confidence		.																												.
Template Conservation		.																												.
Template Sequence		.	R	W	P	D	I	A	F	A	R	I	V	G	T	R	V	K	V	P	I	S	C	I	F	R	K	E	K	.	Q	P	P	I	L	A	R	F	V	E	H	V	R	R	S	A	K	D
Template Known Secondary structure		.			T	T									T	T											S	S	S	.
Template Predicted Secondary structure		.																												.
Template SS confidence
			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions