Job Description P67662 Confidence 95.91% Date Thu Jan 5 12:10:46 GMT 2012 Rank 112 Aligned Residues 77 % Identity 17% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70
Predicted Secondary structure																	.	.	.	.																																			.	.	.	.	.	.	.												.
Query SS confidence																	.	.	.	.																																			.	.	.	.	.	.	.												.
Query Sequence		R	L	K	R	M	S	V	F	A	K	V	V	E	F	G	.	.	.	.	S	F	T	A	A	A	R	Q	L	Q	M	S	V	S	S	I	S	Q	T	V	S	K	L	E	D	E	L	Q	V	K	L	L	N	R	.	.	.	.	.	.	.	S	T	R	S	I	G	L	T	E	A	G	.	R	I	Y	Y	Q	G	C	R
Query Conservation																	.	.	.	.																																			.	.	.	.	.	.	.												.
Alig confidence																	.	.	.	.																										.	.	.							.	.	.	.	.	.	.												.
Template Conservation																																														.	.	.
Template Sequence		T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	E	.	.	.	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I	I	Q
Template Known Secondary structure															S	T	T			B									T	T																.	.	.	T	T	S									T	T	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	H	E	V	Q	D	V	H	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	V	Q	S	W	A	D	R	L	G	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions