Return to main results Retrieve Phyre Job Id

Job DescriptionP67662
Confidence99.74%DateThu Jan 5 12:10:46 GMT 2012
Rank24Aligned Residues200
% Identity13%Templatec3n6uA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130..... ....140.........150.........160........
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Query Sequence  GTLRIGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLI. . . ADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAA
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Template Sequence  GHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIV
Template Known Secondary structure 

T
TT


TTTTTTS
S
GGGS
TT

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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  KSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVPLMWVINEI
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Template Conservation                                                                                  
Template Sequence  GQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNA
Template Known Secondary structure  TT
TTTT

SGGGGTTS

TTSTTTT





TTTTSS
BSST
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   249250.........260.........270.........280.........290.
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Query Sequence  NRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDY
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Template Sequence  FKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHH
Template Known Secondary structure  TGGG



S




TTS


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   252.......260.........270.........280.........290....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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