Return to main results Retrieve Phyre Job Id

Job DescriptionP67662
Confidence69.64%DateThu Jan 5 12:10:46 GMT 2012
Rank251Aligned Residues46
% Identity20%Templatec3jyvT_
PDB info PDB header:ribosomeChain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution
Resolution8.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.... .....60........ .70.......
Predicted Secondary structure 





.

.
Query SS confidence 

























.













.








Query Sequence  SVSSISQTVSKLEDELQVKLLNRSTR. SIGLTEAGRIYYQG. CRRMLHEVQ
Query Conservation 

 


  
  

  

  

 
   .   

  
  
   .
   
    
Alig confidence 













...








.













.








Template Conservation 

 


  




 ... 
 


    

 

  
   

 

  
     
Template Sequence  SGSINRKVLQALEK. . . IGIVEISPKGGRRISENGQRDLDRIAAQTLEEDE
Template Known Secondary structure  T...TTS

B
TTSSB



Template Predicted Secondary structure 
...









Template SS confidence 


















































   97..100.........110 .........120.........130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions