Job Description P67662 Confidence 99.77% Date Thu Jan 5 12:10:46 GMT 2012 Rank 19 Aligned Residues 200 % Identity 25% Template c3hhfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	T	L	R	I	G	C	S	S	T	M	A	Q	N	V	L	A	G	L	T	A	K	M	L	K	E	Y	P	G	L	S	V	N	L	V	T	G	I	P	A	P	D	L	I	A	D	G	L	D	V	V	I	R	V	G	A	L	Q	D	S	S	L	F	S	R	R	L	G	A	M	P	M	V	V	C	A	A	K	S
Query Conservation
Alig confidence																																																											.	.
Template Conservation																																																											.	.
Template Sequence		Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	R	K	V	D	I	A	L	R	A	G	D	.	.	D	S	G	L	R	A	R	H	L	F	D	S	R	F	R	V	I	A	S	P	E
Template Known Secondary structure																	T													T	T									S	T	T					T	T	S	S	S								.	.		S	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	T	Q	Y	G	I	P	E	K	P	A	D	L	S	S	H	S	W	L	E	Y	S	V	R	P	D	N	E	F	E	L	I	A	P	E	G	I	S	T	R	L	I	P	Q	G	R	F	V	T	N	D	P	M	T	L	V	R	W	L	T	A	G	A	G	I	A	Y	V	P	L	M	W	V	I	N	E	I	N	R
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	.	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L	S	D	F	L	V	D	N	D	I	A	E
Template Known Secondary structure										S	S	G	G	G	G	G	G	S		B				.	S	S		G	G	G	G							T	T	S								S	S			S	S										T	T	S		B
Template Predicted Secondary structure																								.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		251	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		G	E	L	E	I	L	.	L	P	R	Y	Q	S	D	P	R	P	V	Y	A	L	Y	T	E	K	D	K	L	P	L	K	V	Q	V	V	I	N	S	L	T	D	Y	F	V
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L	G
Template Known Secondary structure		T	S	S					T	T	T	B													G	G	G	G	G																.
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions