 |
Job Description | P67662 | Confidence | 97.57% | Date | Thu Jan 5 12:10:46 GMT 2012 |
Rank | 57 | Aligned Residues | 75 |
% Identity | 19% | Template | c2pexA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional regulator ohrr; |
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
|
Resolution | 1.90 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | K | R | M | S | V | F | A | K | V | V | E | F | G | . |
. |
S | F | T | A | A | A | R | Q | L | Q | M | S | V | S | S | I | S | Q | T | V | S | K | L | E | D | E | L | Q | V | K | L | L | N | R | S | T | R | S | I | G | L | T | E | A | G | R | I | Y | Y | Q | G | C | R | R | M | L | H | E | V | Q | D | V | H |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |   |
|   |   |   |
| . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   | . | . | . |   |
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | Y | P | Q | Y | L | V | M | L | V | L | W | E | T | D | E | R | S | V | S | E | I | G | E | R | L | Y | L | D | S | A | T | L | T | P | L | L | K | R | L | Q | A | . |
. |
. |
A | G | L | V | T | R | T | R | V | I | I | A | L | T | E | T | G | R | A | L | R | S | K | A | G | A | V | P | E | Q | V | F | C | A | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | S |
| S |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T | S |  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  | G | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|