 |
Job Description | P67662 | Confidence | 24.60% | Date | Thu Jan 5 12:10:46 GMT 2012 |
Rank | 384 | Aligned Residues | 45 |
% Identity | 13% | Template | c2gajA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:dna topoisomerase i; |
PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form
|
Resolution | 1.95 Å |
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | S | S | I | S | Q | T | V | S | K | L | E | D | E | L | Q | V | K | L | L | N | R | S | T | R | S | I | G | L | T | E | A | G | R | I | Y | Y | Q | G | C | R | R | M | L | H | E | V |
Query Conservation |   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|
|   |
|   |   | . | . | . |
|   |
|
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
Template Sequence |   |
R | P | S | T | Y | A | S | T | I | K | L | L | L | N | . |
. |
. |
R | G | Y | I | K | K | I | R | G | Y | L | Y | P | T | I | V | G | S | V | V | M | D | Y | L | E | K | K | Y | S | D | V |
Template Known Secondary structure |   |
| T | T | T |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T | S |  |  |  |  | T | T |  |  |  |  | B |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
461 | . | . | . | . | . | . | . | . | 470 | . | . | . | . | |
|
|
. | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|