Job Description P75777 Confidence 99.88% Date Wed Jan 25 15:21:02 GMT 2012 Rank 5 Aligned Residues 221 % Identity 28% Template d1vf7a_ SCOP info HlyD-like secretion proteins HlyD-like secretion proteins HlyD-like secretion proteins Resolution 2.40

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		31	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		D	N	G	L	T	L	Y	G	N	V	D	I	.	R	T	V	N	L	S	F	R	V	G	G	R	V	E	S	L	A	V	D	E	G	D	A	I	K	A	G	Q	V	L	G	E	L	D	H	K	P	Y	E	I	A	L	M	Q	A	K	A	G	V	S	V	A	Q	A	Q	Y	D	L	M	L	A	G	Y	R	N	E	E
Query Conservation														.
Alig confidence														.																																																												.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		T	L	N	T	E	L	P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	Y	Q	S	A	Q	A	N	L	A	S	T	Q	E	Q	A	Q	R	Y	.	.	.	.	.	.	.	.
Template Known Secondary structure														S								S	S									S		S	S					T	T	S																																.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Q	A	A	A	A	V	K	Q	A	Q	A	A	Y	D	Y	A	Q	N	F	Y	N	R	Q	Q	G	L	W	K	S	R	T	I	S	A	N	D	L	E	N	A	R	S	S	R	D	Q	A	Q	A	T	L	K	S	A	Q	D	K	L	R	Q	Y	R	S	G	N	R	E	Q	D	I	A	Q	A	K	A	S	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	L	V	A	D	Q	A	V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																												98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																												.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	Q	A	Q	L	A	Q	A	E	L	N	L	Q	D	S	T	L	I	A	P	S	D	G	T	L	L	T	R	A	V	E	P	G	T	V	L	N	E	G	G	T	.	.	V	F	T	V	S	L	T	R	P	V	W	V	R	A	Y	V	D	E	R	N	L	D	Q	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	K	A	A	V	E	Q	A	R	I	N	L	R	Y	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V	D	V	T	Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A
Template Known Secondary structure																T	T					S	S	S							S	S		T	T					T	T		S	S		S							S																							T	S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
			256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Q	P	G	R	K	V	L	L	Y	T	D	G	R	P	D	K	P	Y	H	G	Q	I	G	F	V	S	P	T	A	E	F	T	P	K	T	V	E	T	P	D	L	R	T	D	L	V	Y	R	L	R	I	V	V	T	D	A	D	D	A	L	R	Q	G	M	P	V	T	V	Q	F	G	D	E
Query Conservation		.
Alig confidence		.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	N	A	A	K	V	S	L	K	L	E	D	G	S	Q	Y	P	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	T	G	S	.	.	.	.	.	.	.	.	.	.	.	V	T	I	R	A	V	F	P	N	P	N	N	E	L	L	P	G	M	F	V	H	A	Q	L	Q	E	G
Template Known Secondary structure			T	T									T	T	S				S	S						S	S		S				S	S	S	S		.	.	.	.	.	.	.	.	.	.	.					B					S	S	S				T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.												.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions