Job Description P75777 Confidence 35.96% Date Wed Jan 25 15:21:02 GMT 2012 Rank 110 Aligned Residues 65 % Identity 9% Template c2rdeB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vca0042; PDBTitle: crystal structure of vca0042 complexed with c-di-gmp Resolution 1.92 Å

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		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.						.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		R	N	L	D	Q	A	Q	P	G	R	K	V	L	L	Y	T	D	G	R	P	D	K	P	Y	H	G	Q	I	G	F	V	S	P	T	A	E	F	T	P	K	T	V	E	T	P	D	L	R	T	D	L	V	Y	R	L	R	I	V	V	T	D	A	D	D	A	.	.	.	.	.	L	R	Q	G	M	P	V	T	V	Q
Query Conservation																																																																			.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	A	M	V	E	H	S	S	E	L	T	L	S	I	T	T	P	V	G	T	K	F	V	C	R	T	P	F	I	G	T	H	T	D	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	V	E	M	P	K	I	S	A	D	D	L	Q	Y	F	F	Q	E	G	F	W	M	N	I	R
Template Known Secondary structure					T	T	S		T	T										S	S	S														T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		325	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	D	E	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	S	P	R	G
Template Known Secondary structure						S	B
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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