Job Description P75777 Confidence 99.06% Date Wed Jan 25 15:21:02 GMT 2012 Rank 7 Aligned Residues 113 % Identity 22% Template c2k33A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:acra; PDBTitle: solution structure of an n-glycosylated protein using in2 vitro glycosylation Resolution UNK

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	L	S	F	R	V	G	G	R	V	E	S	L	A	V	D	E	G	D	A	I	K	A	G	Q	V	L	G	E	L	D	H	K	P	Y	E	I	A	L	M	Q	A	K	A	G	V	S	V	A	Q	A	Q	Y	D	L	M	L	A	G	Y	R	N	E	E	I	A	Q	A	A	A	A	V	K	Q	A	Q	A	A	Y
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	I	K	P	Q	V	S	G	V	I	V	N	K	L	F	K	A	G	D	K	V	K	K	G	Q	T	L	F	I	I	E	Q	D	Q	A	S	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S											T	T					T	T									S			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	A	Q	N	F	Y	N	R	Q	Q	G	L	W	K	S	R	T	I	S	A	N	D	L	E	N	A	R	S	S	R	D	Q	A	Q	A	T	L	K	S	A	Q	D	K	L	R	Q	Y	R	S	G	N	R	E	Q	D	I	A	Q	A	K	A	S	L	E	Q	A	Q	A	Q	L	A	Q	A	E	L	N	L	Q	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	R	S	K	A	L	F	S	Q	S	A	I	S	Q	K	E	Y	D	S	S	L	A	T	L	D	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				S				S	S	T	T	S		T	T	T			S	T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																							41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	T	L	I	A	P	S	D	G	T	L	L	T	R	A	V	E	P	G	T	V	L	N	E	G	G	.	T	V	F	T	V	S	L	T	R	P	V	W	V	R	A	Y	V	D	E	R	N
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		T	E	I	K	A	P	F	D	G	T	I	G	D	A	L	V	N	I	G	D	Y	V	S	A	S	T	T	E	L	V	R	V	T	N	L	N	P	I	Y	A	D	G	S	H	H	H	H	H
Template Known Secondary structure							S	S	S							S	S		T	T					S	T	T			S					S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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