Job Description P75777 Confidence 27.88% Date Wed Jan 25 15:21:02 GMT 2012 Rank 129 Aligned Residues 105 % Identity 16% Template c1yc9A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:multidrug resistance protein; PDBTitle: the crystal structure of the outer membrane protein vcec from the2 bacterial pathogen vibrio cholerae at 1.8 resolution Resolution 1.80 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		L	D	H	K	P	Y	E	I	A	L	M	Q	A	K	A	G	V	S	V	A	Q	A	Q	Y	D	L	M	.	.	.	.	.	.	L	A	G	Y	R	N	E	E	I	A	Q	A	A	A	A	V	K	Q	A	Q	A	A	Y	D	Y	A	Q	N	F	Y	N	R	Q	Q	G	L	W	K	S	R	T	I	S	A	N	D	L
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	G	G	R	L	E	G	Q	L	T	S	A	E	A	R	Y	Q	E	A	V	A	Q	Y	N	G	T	L	V	Q	A	L	H	E	I	A	D	V	V	T	S	S	Q	A	L	Q	A	R	I	N	K	T	E	Q	A	V	Q	Q	A	E	Q	A	L	H	I	A	T	N	R	Y	Q	G	G	L	A	T	Y	L	D	V
Template Known Secondary structure				T	T																																																																			T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	R	S	S	R	D	Q	A	Q	A	T	L	K	S	A	Q	D	K	L	R	Q	Y	R	S	G	N	R	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	E	E	S	L	L	N	N	Q	R	A	L	V	N	L	Q	S	R	A	F	S	L	D	L	A	L	I	H	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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