Job Description P75989 Confidence 88.43% Date Thu Jan 5 12:16:59 GMT 2012 Rank 40 Aligned Residues 67 % Identity 25% Template d1pdnc_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.														.	.	.	.	.	.	60	.
Predicted Secondary structure																										.	.	.												.																.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																										.	.	.												.																.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		Y	S	I	G	D	V	A	E	R	C	G	I	N	P	V	T	L	R	A	W	Q	R	R	Y	.	.	.	G	L	L	K	P	Q	R	S	E	G	G	.	H	R	L	F	D	E	E	D	I	Q	R	I	E	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	W	I	S	N	G	V	.	.	.	.	.
Query Conservation																										.	.	.												.																.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence																										.	.	.												.																.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		I	R	P	C	V	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	N	R	Y	Q	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	R	I	A	T	P	E	I	E	N	R	I	E	E	Y	K	R	S	S	P	G	M	F	S	W	E	I	R	E	K	L	I	R	E	G	V	C	D	R	S	T
Template Known Secondary structure												T																			S	S					S						S	S		S	T								T	T	T	T		T	T													T	S	S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
				62	.	.	.	.	.	.	.	70
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	V	G	K	V	K	A	L	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	P	S	V	S	A	I	S	R	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions