Return to main results Retrieve Phyre Job Id

Job DescriptionP75989
Confidence99.35%DateThu Jan 5 12:16:59 GMT 2012
Rank14Aligned Residues160
% Identity7%Templatec1bmtB_
PDB info PDB header:methyltransferaseChain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100.........110 .........120.........130.. .......140.........150.......
Predicted Secondary structure  .


..
...
Query SS confidence 


























.





















. .
























. . .
Query Sequence  LQEEMMSILRMANPAKLRARIISLGRE. YPVDQLINHVYLPVRQRLVLDH. . NTSRIMSSMFDGALIEYAATSLFEM. . .
Query Conservation         

           
      .          
 

   

   ..       
          
      ...
Alig confidence 


























.





















..
























...
Template Conservation    
 
  


 

       
  

  
     

   
 
 
  

  

 
   
 
   

         
      
Template Sequence  VNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEA
Template Known Secondary structure  T

SSSSSTTTSS
T
Template Predicted Secondary structure 











Template SS confidence 















































































   659660.........670.........680.........690.........700.........710.........720.........730........
 
   158.160.........170......... 180.........190.........200.... .....210.........220........
Predicted Secondary structure  ..











..











.....








Query SS confidence  . .





















. .
























. . . . .























Query Sequence  . . RRKPGKEAILMAWNVEERARLW. . LEAWRLSLSGWHISVLADPIESPRP. . . . . ELFPTQTLIVWTGMAPTRRQNELL
Query Conservation  ..         
      
  

 ..
    
   
     

     
  ..... 
      
         
     
Alig confidence  ..





















..
























.....























Template Conservation          
 


 

 

 



  

   
   
  
  

  

 
  
        
 



 
           
Template Sequence  SKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVA
Template Known Secondary structure  S

S


S

TT



TTS


SS

T
S

S
Template Predicted Secondary structure 































Template SS confidence 















































































   739740.........750.........760.........770.........780.........790.........800.........810........
 
   229230..... ....240...
Predicted Secondary structure 

..




Query SS confidence 






. .







Query Sequence  QHWGEQG. . YKVIFHAP
Query Conservation      


..        
Alig confidence 






..







Template Conservation    
   
    
 



Template Sequence  KEMERQGFTIPLLIGGA
Template Known Secondary structure  TT

S
ST
Template Predicted Secondary structure 







Template SS confidence 
















   819820.........830.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions