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Job DescriptionP07762
Confidence100.00%DateThu Jan 5 11:00:31 GMT 2012
Rank71Aligned Residues336
% Identity18%Templated2aaaa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.. .......270.........280.........290... ....
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Query Sequence  ANQFDAPISIYEVHLGSWRRHTDNNFW. . . . . . . . . . . . LSYRELADQLVPYAKWMGFTHLELLPINEHP. . . . . . FDGS
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Template Sequence  SAASWRTQSIYFLLTDRFG. RTDNSTTATCNTGNEIYCGGSWQGIIDHL. DYIEGMGFTAIWISPITEQLPQDTADGEAY
Template Known Secondary structure 
TT




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TT

S




GGG
S




T.TTT








BTTB
ST
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   2.......10.........20 .........30.........40......... 50.........60.........70.........
 
   298.300.........310.........320.........330.........340.........350. ........360.......
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Query Sequence  WGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEF. . . . . . . DGTNLYEHSDPREGYH. . .
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Template Sequence  HGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLT
Template Known Secondary structure  TS
S
TTT

TTT


SB

BSS
GGG

GGGSBS

SGGGB



B


TT
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   368.370.........380.........390.........400.........410.........420.........430........
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Query Sequence  . . . . . . . . . QDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEF
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Template Sequence  MVEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEV. . . . . . . . . . . . . . . . . . . . . . . . QPDF
Template Known Secondary structure  SB
SSS
BB
TTST

S
STTS........................
GGG
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   160.........170.........180.........190.........200.........210. ....
 
   439440.........450.........460.........470.........480.........490.........500.........510 ......
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Query Sequence  LRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFG. . ILYNYT
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Template Sequence  FPGYNKA. . . . . SGVYCVGEIDNGNPASDCPYQK. . . VLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVASDCSDPT
Template Known Secondary structure  .....TS



S
GGGGG...TSSB
SSTTS

S
GG
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   216...220.. .......230.........240.... .....250.........260.........270.........280.......
 
   517..520.........530.........540.........550.........560.........570.........580. ........590....
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Query Sequence  ENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHD. . ASLDWHLLEGGDN
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Template Sequence  LLGNFIENHDNPRFA. . . . . . . . . . KYTSDYSQAKNVLSYIFLSDGIPIVYAGEEQHYAGGKVPYNREATWLS. . . . GYD
Template Known Secondary structure  GS
S

TTS

GG..........GT


SSSTTTTTT



TTTTT


GGGG....TT
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   288.290.........300.. .......310.........320.........330.........340.........350 ...
 
   595....600.........610.........
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Query Sequence  WHHGVQRLVRDLNLTYRHHKAMHEL
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Template Sequence  TSAELYTWIATTNAIRKLAIAADSA
Template Known Secondary structure  TT

TT
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   354.....360.........370........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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