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Job DescriptionP07762
Confidence96.93%DateThu Jan 5 11:00:31 GMT 2012
Rank191Aligned Residues129
% Identity19%Templated1uasa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270..... ....280.........290........ .300.........310.........320.........330.........
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Query Sequence  SYRELADQLVPY. AKWMGFTHLELLPINEHPFDGSW. . . GYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPG
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Template Sequence  IIRETADALVNTGLAKLGYQYVNI. . . . . . . . DDCWAEYSRDSQGNFVPNRQ. TFPSGIKALADYVHAKGLKLGIYSDA.
Template Known Secondary structure  TST


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   27..30.........40.........50 .........60.........70 .........80.........90......
 
   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  HFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GSQTCSNKMPGSLDHEEQDVKTFASW. GVDYLKYDNC. . . . . . . . . . . .
Template Known Secondary structure  ...............................SSB
TTSSSB

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   97..100.........110.........120.. .......130..
 
   420.........430.........440.........450.....
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Query Sequence  GEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVT
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Template Sequence  . . . . . . . . . NDAGRSVMERYTRMSNAMKTYGKNIFF
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   133......140.........150.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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