 |
Job Description | P07762 | Confidence | 92.32% | Date | Thu Jan 5 11:00:31 GMT 2012 |
Rank | 277 | Aligned Residues | 74 |
% Identity | 22% | Template | d1gvia2 |
SCOP info | Glycosyl hydrolase domain
| Glycosyl hydrolase domain
| alpha-Amylases, C-terminal beta-sheet domain
|
Resolution | 3.3 |
|
 |
  |   |
633 | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | K | E | R | S | V | L | I | F | V | R | R | D | K | E | G | N | E | I | I | V | A | S | N | F | T | P | V | P | R | H | D | Y | R | F | G | I | N | Q | P | G | K | W | R | E | I | L | N | T | D | S | M | H | Y | H | G | S | N | A | G | N | G | G | T | V | H | S | D | E | I | A | S | H | G | R | Q | H | S | L | S |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |
|   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |
|   |
|
|   | . |
|   |   |   |
|   |   |
|
|
|   |
|   |
|
| . |
|   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
D | D | E | V | N | H | L | V | Y | A | K | T | D | G | N | . |
E | T | V | M | I | I | I | N | R | S | N | E | A | A | E | . |
I | P | M | P | I | D | A | R | G | K | W | L | V | N | L | L | T | G | E | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | A | A | E | A | E | T | L | C |
Template Known Secondary structure |   |
S | S |
| T | T |  |  |  |  |  |  |  |  | T | T | . |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  | . |  |  |  |  |
|
| T | T |
|
|
|  |  |  | T | T | T |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
| S | S |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
514 | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | |
. | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | |
. | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 570 | . | . |
  |
  |   |
713 | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | L | P | P | L | A | T | I | W | L | V | R | E | A |
Query Conservation |   |
|   |
|
|
|   |
|   |
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |
|
|
|
|
|
|
|
Template Sequence |   |
V | S | L | P | P | Y | G | F | V | L | Y | A | V | E | S |
Template Known Secondary structure |   |
 |  |  |
| T | T |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
573 | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|