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Job DescriptionP07762
Confidence92.63%DateThu Jan 5 11:00:31 GMT 2012
Rank273Aligned Residues385
% Identity12%Templatec3ogrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-galactosidase; PDBTitle: complex structure of beta-galactosidase from trichoderma reesei with2 galactose
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTR. . . RFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDF
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Template Sequence  LDVFHKIKALGFNTVSF. . . . . . . . . . . . . YVDWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLLARPGP. . . . . . . .
Template Known Secondary structure  TT

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SBTTB



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   7980.........90..... ....100.........110.........120.........130.......
 
   347..350.........360.........370 .........380.........390.........400.........410.........420...
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Query Sequence  ALAEFDGTNLYEHSDPREGYHQDW. . . NTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWI
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Template Sequence  . . . . . . . . . . YINAEVSGGGFPGWLQRVKGKLRTDAPDYLHATDNYVAHIASI. . . . . . . . . . IAKAQITNGGPVILYQP
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TTBGGGG

GGGGG

S
TTS

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   138.140.........150.........160.........170.........180 .........190.......
 
   424..... 430.........440.........450.........460.........470......... 480.........490........
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Query Sequence  PNEFGG. . . RENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWY. . KWNLGWMHDTLDYMKLDPV
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Template Sequence  ENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGL
Template Known Secondary structure  SS



B
TTS
SS
TT

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BB

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TT
TTS
TT

SB

TT
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TT


TT
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   198.200.........210.........220.........230.........240.........250.........260.........270.......
 
   499500.........510.........520.........530.........540.........550.........560.........570........
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Query Sequence  YRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREW
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Template Sequence  PTTWRQDHLNISPSTPFSLVEFQGGAFDPFG. GWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLGHP
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TTS

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SSTT
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   278.280.........290.........300........ .310.........320.........330.........340.........350......
 
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Query Sequence  NHDASLDWHLLEGGDNWHH. GVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNF
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Template Sequence  GGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSPGYITATPENAT. . . QGVYSDSQNIVITPLLAKESGDFFVVRHA
Template Known Secondary structure  TS
SB

TT
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ST
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B...SSSSSS
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   357..360.........370.........380.........390.........400.... .....410.........420.........430...
 
   658.660.........670.........680.........690.........700.........710.........720.....
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Query Sequence  TPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVR
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Template Sequence  NYSSTDTASYTV. . . . . . . . . . . . . . . . . . . . . . . . . . KLPTSAGDLTIPQLGGSLTLTGRDSKIHVT
Template Known Secondary structure  STT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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