Job Description P07762 Confidence 97.33% Date Thu Jan 5 11:00:31 GMT 2012 Rank 171 Aligned Residues 190 % Identity 16% Template c3lmyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-hexosaminidase subunit beta; PDBTitle: the crystal structure of beta-hexosaminidase b in complex with2 pyrimethamine Resolution 2.80 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.								310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		G	S	W	R	R	H	T	D	N	N	F	W	L	S	Y	R	E	L	A	D	Q	L	V	P	Y	A	K	W	M	G	F	T	H	L	E	L	L	P	I	N	E	H	P	F	D	G	S	W	G	Y	Q	P	T	G	L	Y	A	P	T	.	.	.	.	.	.	.	R	R	F	G	T	R	D	D	F	R	Y	F	I	D
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence															.	.																									.	.	.	.																	.	.	.	.	.	.	.
Template Conservation															.	.																									.	.	.	.
Template Sequence		R	G	I	L	I	D	T	S	R	H	Y	L	P	.	.	V	K	I	I	L	K	T	L	D	A	M	A	F	N	K	F	N	V	L	H	W	H	I	V	.	.	.	.	D	D	Q	S	F	P	Y	Q	S	I	T	F	P	E	L	S	N	K	G	S	Y	S	L	S	H	V	Y	T	P	N	D	V	R	M	V	I	E
Template Known Secondary structure								S	S	S	S				.	.														T	T										.	.	.	.	B	T	T	B			B			S	S									S	S	S	T	T	S		B
Template Predicted Secondary structure															.	.																									.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		A	A	H	A	A	G	L	N	V	I	L	D	W	.	V	P	G	H	F	P	T	D	D	F	A	L	A	E	F	D	G	T	N	L	Y	E	H	S	D	P	R	E	G	Y	H	Q	D	W	N	T	L	I	Y	N	Y	G	R	R	E	V	S	N	F	L	V	G	N	A	L	Y	W	I	E	R	F	G	I	D	A	L
Query Conservation															.
Alig confidence															.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	R	L	R	G	I	R	V	L	P	E	F	D	T	P	G	H	T	L	S	W	G	K	G	Q	K	D	L	L	T	P	C	Y	S	D	.	.	.	.	.	.	.	.	.	.	.	.	S	F	G	P	I	N	P	T	L	N	T	T	Y	S	F	L	T	T	F	F	K	E	I	S	E	V	F	P	D	Q	F	I
Template Known Secondary structure					T	T	T										S	S	S		G	G	G	G	T	T	S	T	T									.	.	.	.	.	.	.	.	.	.	.	.							T	T																					S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.													.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		403	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		R	V	.	.	D	A	V	A	S	M	I	Y	R	D	Y	S	R	K	E	G	E	W	I	P	N	E	F	G	G	R	E	N	L	E	A	I	E	F	L	R	N	T	N	R	I	L	G	E	Q	V	S	G	A	V	T	M	A	E
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		H	L	G	G	D	E	V	E	F	K	C	W	E	S	N	P	K	I	Q	D	F	M	R	Q	K	G	F	G	T	D	F	K	K	L	E	S	F	Y	I	Q	K	V	L	D	I	I	A	T	I	N	K	G	S	I	V	W	Q	E
Template Known Secondary structure							S																			T	T		T	T		S																		T	T							T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions