Job Description P07762 Confidence 100.00% Date Thu Jan 5 11:00:31 GMT 2012 Rank 1 Aligned Residues 708 % Identity 49% Template c3k1dA_ PDB info PDB header:transferase Chain: A: PDB Molecule:1,4-alpha-glucan-branching enzyme; PDBTitle: crystal structure of glycogen branching enzyme synonym: 1,4-alpha-d-2 glucan:1,4-alpha-d-glucan 6-glucosyl-transferase from mycobacterium3 tuberculosis h37rv Resolution 2.33 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	D	V	I	N	A	L	I	A	G	H	F	A	D	P	F	S	V	L	G	M	H	K	T	T	A	G	L	E	V	R	A	L	L	P	D	A	T	D	V	W	V	I	E	P	K	T	G	R	K	L	A	K	L	E	C	L	D	S	R	G	F	F	S	G	V	I	P	R	R	K	N	F	F	R	Y	Q	L	A
Query Conservation
Alig confidence																																															.	.	.												.										.
Template Conservation																																															.	.	.												.										.
Template Sequence		E	P	A	E	M	A	R	L	V	A	G	T	H	H	N	P	H	G	I	L	G	A	H	E	Y	D	D	H	T	V	I	R	A	F	R	P	H	A	V	E	V	V	A	L	V	.	.	.	G	K	D	R	F	S	L	Q	H	L	D	.	S	G	L	F	A	V	A	L	P	.	F	V	D	L	I	D	Y	R	L	Q
Template Known Secondary structure												T			S						S					S	S	S	S								T	T		S	B					B	.	.	.	T	T	B								T	.	T	S							S	.		S
Template Predicted Secondary structure																																															.	.	.												.										.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.
		86	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure					.																																																.	.	.	.
Query SS confidence					.																																																.	.	.	.
Query Sequence		V	V	W	.	H	G	Q	Q	N	L	I	D	D	P	Y	R	F	G	P	L	I	Q	E	M	D	A	W	L	L	S	E	G	T	H	L	R	P	Y	E	T	L	G	A	H	A	D	T	M	D	G	V	.	.	.	.	T	G	T	R	F	S	V	W	A	P	N	A	R	R	V	S	V	V	G	Q	F	N	Y	W	D
Query Conservation					.																																																.	.	.	.
Alig confidence					.																																																.	.	.	.
Template Conservation
Template Sequence		V	T	Y	E	G	C	E	P	H	T	V	A	D	A	Y	R	F	L	P	T	L	G	E	V	D	L	H	L	F	A	E	G	R	H	E	R	L	W	E	V	L	G	A	H	P	R	S	F	T	T	A	D	G	V	V	S	G	V	S	F	A	V	W	A	P	N	A	K	G	V	S	L	I	G	E	F	N	G	W	N
Template Known Secondary structure			B		T	T	S								G	G	G	S			S	S										T	T			T	T	G	G	G	T	S										S	S	S												T	T		S							G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		G	R	R	H	P	M	R	L	R	K	E	S	G	I	W	E	L	F	I	P	G	A	H	N	G	Q	L	Y	K	Y	E	M	I	D	A	N	G	N	L	R	L	K	S	D	P	Y	A	F	E	A	Q	M	R	P	E	T	A	S	L	I	C	G	L	.	.	.	P	E	K	V	V	Q	T	E	E	R	K	K	A	N
Query Conservation																																																																	.	.	.
Alig confidence																																																																	.	.	.
Template Conservation
Template Sequence		G	H	E	A	P	M	R	V	L	G	P	S	G	V	W	E	L	F	W	P	D	F	P	C	D	G	L	Y	K	F	R	V	H	G	A	D	G	V	V	T	D	R	A	D	P	F	A	F	G	T	E	V	P	P	Q	T	A	S	R	V	T	S	S	D	Y	T	W	G	D	D	D	W	M	A	G	R	A	L	R	N
Template Known Secondary structure				S		B					G	G	G									T			T	T										T	T	S								T	T		S	S	B			T	T														S									T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	D	A	P	I	S	I	Y	E	V	H	L	G	S	W	R	R	H	T	D	N	N	F	W	L	S	Y	R	E	L	A	D	Q	L	V	P	Y	A	K	W	M	G	F	T	H	L	E	L	L	P	I	N	E	H	P	F	D	G	S	W	G	Y	Q	P	T	G	L	Y	A	P	T	R	R	F	G	T	R	D	D
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		P	V	N	E	A	M	S	T	Y	E	V	H	L	G	S	W	R	P	G	.	.	.	.	.	.	L	S	Y	R	Q	L	A	R	E	L	T	D	Y	I	V	D	Q	G	F	T	H	V	E	L	L	P	V	A	E	H	P	F	A	G	S	W	G	Y	Q	V	T	S	Y	Y	A	P	T	S	R	F	G	T	P	D	D
Template Known Secondary structure		G	G	G	S									T	T	T	S	S	T	T	.	.	.	.	.	.																		T		S					S						S		G	G	G	T	T		S		S							G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	Y	F	I	D	A	A	H	A	A	G	L	N	V	I	L	D	W	V	P	G	H	F	P	T	D	D	F	A	L	A	E	F	D	G	T	N	L	Y	E	H	S	D	P	R	E	G	Y	H	Q	D	W	N	T	L	I	Y	N	Y	G	R	R	E	V	S	N	F	L	V	G	N	A	L	Y	W	I	E	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	A	L	V	D	A	L	H	Q	A	G	I	G	V	I	V	D	W	V	P	A	H	F	P	K	D	A	W	A	L	G	R	F	D	G	T	P	L	Y	E	H	S	D	P	K	R	G	E	Q	L	D	W	G	T	Y	V	F	D	F	G	R	P	E	V	R	N	F	L	V	A	N	A	L	Y	W	L	Q	E	F
Template Known Secondary structure												T	T									T	T						T	T	T	T	T	T	T	T	S	S			S	B						S	S	S	T	T							B		T	T	S																		S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	A	L	R	V	D	A	V	A	S	M	I	Y	R	D	Y	S	R	K	E	G	E	W	I	P	N	E	F	G	G	R	E	N	L	E	A	I	E	F	L	R	N	T	N	R	I	L	G	E	Q	V	S	G	A	V	T	M	A	E	E	S	T	D	F	P	G	V	S	R	P	Q	D	M	G	G	L	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	D	G	L	R	V	D	A	V	A	S	M	L	Y	L	D	Y	S	R	P	E	G	G	W	T	P	N	V	H	G	G	R	E	N	L	E	A	V	Q	F	L	Q	E	M	N	A	T	A	H	K	V	A	P	G	I	V	T	I	A	E	E	S	T	P	W	S	G	V	T	R	P	T	N	I	G	G	L	G	F
Template Known Secondary structure											T					B							S	S			S				S	S		S	B																			S	T	T									S	S				T	T	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Y	K	W	N	L	G	W	M	H	D	T	L	D	Y	M	K	L	D	P	V	Y	R	Q	Y	H	H	D	K	L	T	F	G	I	L	Y	N	Y	T	E	N	F	V	L	P	L	S	H	D	E	V	V	H	G	K	K	S	I	L	D	R	M	P	G	D	A	W	Q	K	F	A	N	L	R	A	Y	Y	G	W	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	K	W	N	M	G	W	M	H	D	T	L	D	Y	V	S	R	D	P	V	Y	R	S	Y	H	H	H	E	M	T	F	S	M	L	Y	A	F	S	E	N	Y	V	L	P	L	S	H	D	E	V	V	H	G	K	G	T	L	W	G	R	M	P	G	N	N	H	V	K	A	A	G	L	R	S	L	L	A	Y	Q
Template Known Secondary structure		S																	S		G	G	G	G	G	G	G						G	G	G	G	T	T	T	S	S								G	G	G	S	S	T	T	S							S		S	S
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	F	P	G	K	K	L	L	F	M	G	N	E	F	A	Q	G	R	E	W	N	H	D	A	S	L	D	W	H	L	L	E	G	G	D	N	W	H	H	G	V	Q	R	L	V	R	D	L	N	L	T	Y	R	H	H	K	A	M	H	E	L	D	F	D	P	Y	G	F	E	W	L	V	V	D	D	K	E	R	S
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		W	A	H	P	G	K	Q	L	L	F	M	G	Q	E	F	G	Q	R	A	E	W	S	E	Q	R	G	L	D	W	F	Q	L	D	.	E	N	G	F	S	N	G	I	Q	R	L	V	R	D	I	N	D	I	Y	R	C	H	P	A	L	W	S	L	D	T	T	P	E	G	Y	S	W	I	D	A	N	D	S	A	N	N
Template Known Secondary structure				S	S	S						T	T	G	G	G	T			S				T	T	T				G	G	G	G	G	.	S	S	S	S																			G	G	G	T	T	T	T	T	S	G	G	G									T	T	T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	F	V	R	R	D	K	E	G	N	E	I	I	V	A	S	N	F	T	P	V	P	R	H	D	Y	R	F	G	I	N	Q	P	G	K	W	R	E	I	L	N	T	D	S	M	H	Y	H	G	S	N	A	G	N	G	G	T	V	H	S	D	E	I	A	S	H	G	R	Q	H	S	L	S	L	T	L	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	S	F	M	R	Y	G	S	D	G	S	V	L	A	C	V	F	N	F	A	G	A	E	H	R	D	Y	R	L	G	L	P	R	A	G	R	W	R	E	V	L	N	T	D	A	T	I	Y	H	G	S	G	I	G	N	L	G	G	V	D	A	T	D	D	P	W	H	G	R	P	A	S	A	V	L	V	L	P	P
Template Known Secondary structure										T	T	S										S	S	S										S	S										T	T		G	G	G	T	S				S		T	T						S			B	T	T	B	S									T
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
		718	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	I	W	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	A	L	W	L	T	P
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		723	.	.	.	.	.	.	730