Job Description P07762 Confidence 94.98% Date Thu Jan 5 11:00:31 GMT 2012 Rank 244 Aligned Residues 137 % Identity 20% Template c3eypB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative alpha-l-fucosidase; PDBTitle: crystal structure of putative alpha-l-fucosidase from bacteroides2 thetaiotaomicron Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		A	D	Q	L	V	P	Y	A	K	W	M	G	F	T	H	L	E	L	L	P	I	N	E	H	P	F	D	G	S	W	G	Y	Q	P	T	G	L	Y	A	P	T	R	R	F	.	.	G	T	R	D	D	F	R	Y	F	I	D	A	A	H	A	A	G	L	N	V	I	L	D	W	V	P	G	H	F	P	T	D	D	F
Query Conservation																																														.	.
Alig confidence																								.																						.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	R	Q	W	M	Q	T	L	K	A	A	G	I	P	A	A	I	L	T	A	K	H	.	A	D	G	F	C	L	W	P	S	K	Y	T	D	Y	S	V	K	N	A	A	W	K	N	G	K	G	D	V	V	R	E	F	V	D	A	C	E	E	Y	G	L	K	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T											.	T	T			B	S	S			T	T		S	S	B	G	G	G	S	S	G	G	G	G	T															T						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	L	A	E	F	D	G	T	N	L	Y	E	H	S	D	P	R	E	G	Y	H	Q	D	W	N	T	L	I	Y	N	Y	G	R	R	E	V	S	N	F	L	V	G	N	A	L	Y	W	I	E	R	F	G	.	I	D	A	L	R	V	D	A	V	A	S	M	I	Y	R	D	Y	S	R	K	E	G	E	W	I	P	N
Query Conservation																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Y	L	G	P	H	D	R	H	E	H	L	S	P	L	Y	T	T	E	R	Y	K	.	.	.	.	.	.	.	E	Y	Y	A	H	Q	L	G	E	L	M	S	D	Y	G	K	I	W	E	T	W	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				S	S						T	S	T	T								.	.	.	.	.	.	.													S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	G	G	R	E	N	L	E	A	I	E	F	L	R	N	T	N	R	I	L	G	E	Q	V	S	G	A	V	T	M
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	A	G	A	D	E	L	T	T	P	V	Y	R	H	W	Y	K	I	V	R	E	K	Q	P	D	C	V	I	F
Template Known Secondary structure		.	.		T	T		T	T																		T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions